Explore projects

X!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.

Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102

An R package with globally useful function for UREP R developments

Contains code to create and manage the SUDOANG rivers database

Structural Variation detection using SNiP genotyping data in R

R package to run MuSICA

On-line doctoral training on EMULSION

UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase

Repository code for the article: Neuvial Pierre, Randriamihamison Nathanaël, Chavent Marie, Foissac Sylvain, and Vialaneix Nathalie (2023) A two-sample tree-based test for hierarchically organized genomic signals. Preprint.

FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.

Hosts the different implementation of EDA model