Explore projects

Make brand new polymer chemistry definitions; Use the definitions to perform calculations in a desktop calculator-like manner; Perform sophisticated polymer sequence mass spec simulations ; Compute isotopic clusters from formulas

The two libraries of the XpertMass project are libXpertMassCore and libXpertMassGui. The two libraries expose common non-gui and gui functionalities, respectively, that are used by two software pieces of the msXpertSuite organization: MassXpert and MineXpert.

MineXpert (currently MineXpert3, of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to visualize mass spectrometric data in their full MS^n depth. Sophisticated mouse-driven mass data integrations are easily performed.

Site web de MIAT

PREVIEW : https://miat-com.pages-forge.inrae.fr/miat_website (Pour voir vos modifications après un commit, avant que ça ne soit validé)

ASSIGNEZ VOS MERGE REQUESTS à votre correspondant d'équipe/axe : @samuel.buchet (OpTeam), @leo.saulieres (DecA), @bcharlier (ASAP), @benjamin.linard (BioComp), @philippe.bordron (Genotoul) ou @rtrepos (RECORD)

Perform Hi-C data differential analysis based on pixel-level differential analysis and a post hoc inference strategy to quantify signal in clusters of pixels. Clusters of pixels are obtained through a connectivity-constrained two-dimensional hierarchical clustering.

Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.

Python docker image with linters

A project to try things, to test...

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.

Projet de la version V2 de l'application des ORE.

Le projet est constitué de 2 sous projet :

La partie serveur qui fournit les web services de l'application

La partie UI qui fournit une interface VueJS permettant d'interroger ces Web Service

Visualisation de données métagénomiques.

the ontology to describe the interaction between organisms and cultivated plants

AWDV : Activity Wheel Data Visualizer un programme pour l'analyse des données ACTIVYWHEEL sur le long terme et la visualisation des rythmes d'activité.

{AWDV: Activity Wheel Data Visualizer - A Program for Long-Term ACTIVITYWHEEL Data Analysis and Activity Rhythm Visualization}## Nom du logiciel

ActivityWheelDataVisualizer AWDV

Ce programme vise a pour but le regroupement et la présentation des données d'activité des souris enregistrées par le logiciel ACTIVYWHEEL.

a running wheel (23 cm diameter, Intellibio, Seichamps, France).

Spécifité du logiciel présenté

analyse long terme sur plusieurs enregistrements et possibilité d'exclure des jours en fonction des urrégularités d'enregistrement (erreurs ou interventions) et ajout des rythmes d'activité.