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docker compose configs to use robots with tirrex workspace

SATLAND is an application to detect and characterize hotspots of change. It is based on Python libraries (xarray, Bfast, rasterio for back-end, Streamlit for Front-End)

Code and workflows for the analyses reported in “Dici: a novel DNA transposon reshaping the genome of the opportunistic yeast Diutina catenulata”

L'application Dryades Viewer permet de visualiser les données de la BD Dryades regroupant les données forêt du Lessem.

https://dryades-viewer.sk8.inrae.fr

Formation (supports de cours et TP) sur l'analyse statistique de données RNA-seq Formation proposée par la plateforme Genotoul-Bioinfo

set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....

Partie applicative d'AgroMetInfo.

a crop simulation model for sunflower

https://sunflo.pages-forge.inrae.fr/sunflower/

Still under development

changing name for better import

Docs : https://optirrighive.pages.mia.inra.fr/OptirrigCORE

What is “OptirrigCORE” package ? The OptirrigCORE package in R is based on the Optirrig model. It facilitates the extraction and formatting of observation data used by the model, as well as the integration of plant, soil and yield descriptions. It supports various analytical methods, such as Ex-Post and Ex-Ante analyses, with a view to drawing up an optimised irrigation schedule based on the criteria. The package includes all the calculation tools needed to describe biophysical processes with a generalist approach. It can be used as a dependency or complement to modify and reinterpret biophysical descriptions. What’s more, it automates the modeling process, the description of biophysical processes and the analysis of results and performance, guaranteeing a reproducible approach. It also makes it easy to compile results in automated reports.