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PAPPSO / i2MassChroQ
GNU General Public License v3.0 onlyi2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution
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UMR G-EAU / CAWET
GNU Affero General Public License v3.0𝐂𝐀𝐖𝐄𝐓 (Calculation of Agronomical Water needs and EvapoTranspiration) is an open-source tool for automatic estimation of agricultural water needs
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PO2-Tools / PO²Manager
MIT LicenseUpdated -
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GQE-BiOSS / Thaliadb
GNU Affero General Public License v3.0Updated -
open_hardware / SETIER
CERN Open Hardware Licence Version 2 - Strongly ReciprocalUpdated -
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genotoul-bioinfo / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. Since release 2.3, binning step with the possibility of cross-alignment is included. It has been developed in collaboration with several CATI BIOS4biol agents. Funded by Antiselfish Project (Labex Ecofect), ExpoMicoPig project (France Futur elevage) and SeqOccIn project (CPER - Occitanie Toulouse / FEDER), ATB_Biofilm funded by PNREST Anses, France genomique (ANR-10-INBS-09-08) and Resalab Ouest.
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pangepop / MSpangepop
GNU Affero General Public License v3.0Updated -
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GeT-nextflow-NGL-Bi / wf-Illumina-nf
CeCILL Free Software License Agreement v2.1Pipeline Nextflow
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teledec / Teledetection
Apache License 2.0Software Development Kit for the Geospatial Data Center of "la Maison de la Télédédection"
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LESSEM / Rpackages / AlpagesSentinelles
MIT LicenseUpdated -
TEMPO / Portail de données
GNU General Public License v3.0 or laterLe portail de données phénologiques du réseau TEMPO permet la recherche et le téléchargement de données issues de différentes sources ouvertes ou soumises à autorisation.
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UMR G-EAU / RADIS
GNU Affero General Public License v3.0RADIS - Retrieve Agronomic Data in a Sector, R package support : https://umr-g-eau.pages-forge.inrae.fr/radis
The radis package aims to facilitate the extraction of environmental data from various cartographic or spatial sources or APIs. It allows for the retrieval of this information using specific spatial shape. This package also formats the extracted data in a way that makes it easily exploitable for further analysis.
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