Explore projects

Annotation pipeline (transform SGBDR/CSV data to rdf)

Obsolete. This modular version was not easy to manage. See packages in orgemia.inra.fr/metexplore/cbm/met4j-flux

NGSPipelines integrates pipelines and user interfaces to help biologists to analyse data outputed from biological applications such as RNA-seq, sRNA-seq, Chip-Seq, BS-seq, and so on.

Prima Regional Model developped during the UE project PRIMA (2008-2011). This code has been produced by Sylvie Huet and Nicolas Dumoulin.

Code for JAVA app for stacomi

MetaQTL is a Java package designed to perform the integration of data from the field of gene mapping experiments (e.g molecular markers, QTL, candidate genes, etc...). This package consists in a modular library and several programs written in pure Java. These programs can perform various tasks, including formatting, analyzing and visualizing data or results produced by MetaQTL.

Geometry computing library for the ImageJ software.

This project contains script files associated to the study by Cointe et al. "A double-spiral maze and hi-resolution tracking pipeline to study dispersal by groups of minute insects"

MyChoice application's public repository

Tutorial for met4j

This project contains script files associated to the study by Cointe et al. "A double-spiral maze and hi-resolution tracking pipeline to study dispersal by groups of minute insects"