Explore projects

SATLAND is an application to detect and characterize hotspots of change. It is based on Python libraries (xarray, Bfast, rasterio for back-end, Streamlit for Front-End)

Source code of the GRYC website (http://gryc.inrae.fr).

MAKAHO (pour MAnn-Kendall Analysis of Hydrological Observations) est un système de visualisation cartographique interactif permettant d’examiner les tendances présentes dans les données des stations hydrométriques aux débits peu influencés par les actions humaines. Le test de Mann-Kendall permet d’analyser la significativité des tendances de variables hydrologiques sur les différentes composantes du régime des cours d'eau (étiages, moyennes-eaux, crues), à mettre ensuite en relation avec les impacts du changement climatique sur l’hydrologie de surface.

https://makaho.sk8.inrae.fr

Project used to manage security for In-Sylva Information System

Base docker image for Rare project

A shiny application that make time series events selection and modification simpler.

Lien vers l'application : https://crues-r.sk8.inrae.fr

L'application permet de simuler la dynamique spatio-temporelle de populations de moustiques Aedes (albopictus et aegypti) dans divers environnements et la dynamique de transmission de trois arboviroses : dengue, zika, chikungunya.

Lien vers l'application : https://arbocarto-r-app.sk8.inrae.fr

Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.

shinySbm is a package containing a shiny application. This application is build for network analysis based on the sbm package made by Chiquet J, Donnet S and Barbillon P (2023) CRAN. It allow to apply and explore the outputs of a Stochastic Block Model. It is useful if you want to analyse your data (could be adjacency matrix or edges list) without R language knowledge or to learn the basic lines of the sbm package.

Link to running app: https://matrixapp.sk8.inrae.fr

MATRiX is a shiny application dedicated to Mining and Analysis of Transcriptomics data using common biostatistic result files (statistical test result table, normalised data table and samples-groups information). This application helps biologists to perform data exploration with PCA, Venn diagrams, StripCharts, volcanoplots, and Heatmap clustering of genes lists (selecting statistical thresholds) and functional enrichment analyses using a connection to enrichr. https://matrixapp.sk8.inrae.fr

Connecteur entre dataverse et jupyterhub

Archiving packages generation and export from Dataverse to Vitam platform.