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2h workshop slideshow on how to use Rmarkdown format for writing reproducible report (or slideshow, or even paper)

orgDB containing annotation for Pisum sativum genome v1

Kreplak, J., Madoui, MA., Cápal, P. et al. A reference genome for pea provides insight into legume genome evolution. Nat Genet 51, 1411–1422 (2019). https://doi.org/10.1038/s41588-019-0480-1

The aim of this package is to provide a full genomic features annotation from genomic coordinates, without use an annotation priority.

Global Statistical Inference for Global Sensitivity Analysis

calcul de valeurs de fond d'un contaminant à partir d'une série d'observations Test de méthodes tenant compte de valeurs censurées

Shiny App to explore MetaPDOCheese metagenomic shotgun data.

Here are all the scripts and dataset used for statistical analyses on the ms "The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe"

Test Shiny package ecosystem for software engineering good practice. Use Schauberger et.al. 2021 dataset: Crop yields, area and production in France 1900-2018 (doi:10.5880/PIK.2021.001).

Effect of boosted SIT on the apparent density of Ae. aegypti in La Reunion Island: a field experiment. Slides: https://umr-astre.pages.mia.inra.fr/boosted-sit/Release_BGT.html

Code repository associated with Goutorbe et al 2022.

Supports pour la formation shiny - Plateforme de Biostatistique – Génopole Toulouse Midi-Pyrénées

Livre bookdown de Data Science appliquée à l'agronomie sens large

Sessions Machine et Deep Learning - module Agrotic/Datascience - 03/12 et 07/12

Sessions Machine et Deep Learning - module Agrotic/Datascience - 03/12 et 07/12

R package for modelling arthropod development rates (mean and variance) as a function of temperature in nimble. Adapted from the PhD work of Soledad Castano (http://www.theses.fr/223623849).