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pubilc repository for the ASCROM crop model developped during the ATCHA project

model documentation: https://record-open-archives.pages.mia.inra.fr/ascrom/

A Gitlab project template for an R package. Use it as a base for a new R package project. See README for details.

Analysis of Sterile-Insect Technique Mark-Release-Recapture and pilot population-suppression trial data from Indonesia. https://umr-astre.pages.mia.inra.fr/sit-indonesia/

X!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.

Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102

Source code for the modelling and inference approach implemented by the INRAE team

A short tutorial on (1) fitting basic Weibull survival models in NIMBLE, and (2) two types of shrinkage prior (Dirichlet-Laplace & Horseshoe) for Bayesian variable selection. https://umr-astre.pages.mia.inra.fr/training/nimble-Weibull-Shrinkage

Transcriptomic analysis, microarray and rnaseq, used in IRHS unit

Slides for the session on Reproducible Research in R at MOOD's summer school 2022. https://umr-astre.pages.mia.inra.fr/presentations/reproducible-research-in-r Recording: https://av.tib.eu/media/13751