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panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.

Contribution à la réalisation du "pilote" INRAE, dans le cadre du programme européen GraspOS

Tropolink frontend

Cours accessible à https://genotoul-bioinfo.pages.mia.inra.fr/use-nextflow-nfcore-course/

changing name for better import

AdducTrackR is an R package designed to compute all possible peptide oligomers from the exact masses of proteinogenic amino acids, for any specified degree of oligomerization. It supports in silico modeling of peptide-polyphenol interactions to assist in the annotation of high-resolution mass spectrometry data.