Explore projects

ICEscreen detects and annotates ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements) in Firmicutes genomes.

SATLAND is an application to detect and characterize hotspots of change. It is based on Python libraries (xarray, Bfast, rasterio for back-end, Streamlit for Front-End)

mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel

Harvest and index meta data from BrAPI endpoints for data access through the plant-faidare data lookup portal (https://github.com/elixir-europe/plant-faidare).

DeFIS is a pipeline for archeo-ichtyologists and biologists allowing the recognition of diadromous fishes with ancient DNA sample based metrics method (such as Kmers ratio and Jaccard index) between references sequences and the samples.

basis for development of interactive population dynamics web applications