Explore projects

A pipeline to compute correspondance tables between genome annotations

Source code for https://iant.toulouse.inra.fr/T3E

The pyrocleaner is intended to clean the reads included in the sff file in order to ease the assembly process.

NGSPipelines integrates pipelines and user interfaces to help biologists to analyse data outputed from biological applications such as RNA-seq, sRNA-seq, Chip-Seq, BS-seq, and so on.

The software enable to retrieve information (exon boundaries, mutation effect, known SNP...) about transcribed SNP. It's based on ensembl API.

A gene finding software for eukaryotic and prokaryotic organisms.

TilSeg is a tool designed to use the information from contiguous probes and it will merge them into longer segment stretches. Depending on the experiment, the chip type and the statistical analysis made, those segments may have different meanings and

A presentation and day book area.

DRAP is a De novo Rna Assembly Pipeline allowing to clean and filter RNA-seq De novo assemblers results to get the most compact and complete set of transcripts.

PAQmiR : Prediction Annotation and Quantification of miRNA with miRDeep2