Explore projects

Package d'aide à la qualité et au nettoyage des données pour les plateformes ESV (santé végétale), ESA (santé animale) et SCA (sécurité chaine alimentaire).

Vignette : https://plateformes-epidemiosurveillance.pages-forge.inrae.fr/interplateformes/gt-qdd/package-qdd/how_to_use_qdd.html

the ontology to describe the interaction between organisms and cultivated plants

part of the ANR D2KAB project, this repository is dedicated to the construction of semantic resources (RDF dataset and OWL ontologies) that will represent plant phenological development stages for agricultural practices.

Documentation: https://mse-pathovect-49276b.pages-forge.inrae.fr

This repository contains the scripts used to produce the experiments presented in

Jorge E., Hocking T.D., Neuvial P., Vialaneix N., and Foissac S. (2025) Posthoc inference for interpretable Hi-C differential analysis. preprint

These experiments aims at illustrating the use of the R package hicream that performs differential analysis of Hi-C data.

R-package proposing a framework to apply FAIR principles based on reports created using the bookdown R-package and published as a website (e.g. gitlab pages) and data located on a owncloud/nextcloud server

panTEannot serially annotates transposable elements from multiple genomes using a common reference library. The annotation is a light version of TEannot from REPET package. These annotations can be used as input for the panREPET tool.

Multivariate generalized Gaussian distribution, Multivariate Cauchy distribution, Multivariate t distribution. Distance between two distributions. Manipulation of these multivariate probability distributions.

Vue3 / NodeJS libraries providing webcomponents to easily query the FORVM resources.

An R package for the distribution of the ratio of Gaussian distributions: density function, parameter estimation, simulation. Application to vegetation index, such as chlorophyll fluorescence index.