Missing conda rules

See merge request !7

Resolve "IMPROVE: gmap rescue in global scale"

See merge request !6

Merge branch '5-improve-renamegffids-py-build-chromosome-map-based-on-input-gff-and-not-mapping-file' into 'missing_conda_rules'

IMPROVE: initialise chromosomeMap dict while reading input GFF

See merge request !5

change pattern for name of slurm outputs

See merge request !4

change partition from normal/fast to gdec on every tasks

See merge request !3

remove temp() from rules/geneAnchoring.smk rules and cumulate attributes in final gf for prevous_id gff feaure

Update README.md

See merge request !2

bug: if cds and mapping attributes existed in query GFF file, values were collapsed. Now the values correspond to the current anchring results.

convert gff3 to txt for transcripts from a single gene  mapped on different chromosome while runnin gmap on whole genome

Parallelisation julius

See merge request !1

remove temporary fasta files to loawer disk usage. lower coverage and identity threshold in gmap rescue