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utilitaire pour la manipulation de fichiers Fasta : ajout de métadonnées (espèces, numéro de release, source...), traduction, traitements (decoy, reverse, peptide reverse...), combinaison de fichiers.

A Python implementation of the catdes() function from the FactoMiner R package (http://factominer.free.fr/factomethods/description-des-modalites.html) with extras.

panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.

Exploitation et maintenance du thésaurus INRAE, thésaurus ouvert et partagé couvrant les domaines de recherche d’INRAE. Il sert de référentiel au sein de l’institut pour indexer et annoter des documents, pages web, descriptions d’activités, jeux de d

https://lisc.pages.mia.inra.fr/leviathan/

Leviathan is an opinion dynamics model that combines processes of vanity and opinion propagation.

Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.

The Orfeo ToolBox (OTB) extension for Deep Learning. Enable the use of TensorFlow models on Remote Sensing images. Provides OTB applications for patches sampling, model training, model inference, hybrid models, and so on.