Explore projects

Pipeline used to tranfert gene annotation (GFF3) between different versions of assemblies.

Command line tool to compute volume of soil samples from images to estimate soil bulk density as in

Coulouma G, Feurer D, Vinatier F, Huttel O. Assessing new sensor-based volume measurement methods for high-throughput bulk density estimation in the field under various soil conditions. Eur J Soil Sci. 2021; 72: 2049–2061. https://doi.org/10.1111/ejss.13115

Scripts related with database development in stacomi.

Online version of the shiny application of the R package SOMbrero to performs Self Organizing Maps (https://sombrero.sk8.inrae.fr)

Used to manage account, policies and sources. Access reserved to insylva administrators and source managers

GfaViz as Appimage (no compilation needed)

Visualisation de données métagénomiques.

https://inspect.sk8.inrae.fr/

Exploration interactive de scenario de simulation du modèle MF1.2-1ha du projet Atcha.

https://mf-12-1-ha.sk8.inrae.fr/ | https://shiny.sk8.inrae.fr/app/atcha-mf-12-1-ha | https://shiny.sk8.inrae.fr/app_direct/atcha-mf-12-1-ha

The Orfeo ToolBox (OTB) extension for Deep Learning. Enable the use of TensorFlow models on Remote Sensing images. Provides OTB applications for patches sampling, model training, model inference, hybrid models, and so on.