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Angular interface of the Cassiopée software

Production version of Cassiopée is available at https://cassiopee.g-eau.fr

Replication repository for the article "A comprehensive review and benchmark of differential analysis tools for Hi-C data"

https://biblio-tetis.sk8.inrae.fr

A small project to set up a filtered search bar like in Gitlab (pipelines page)

Link to running app: https://matrixapp.sk8.inrae.fr

MATRiX is a shiny application dedicated to Mining and Analysis of Transcriptomics data using common biostatistic result files (statistical test result table, normalised data table and samples-groups information). This application helps biologists to perform data exploration with PCA, Venn diagrams, StripCharts, volcanoplots, and Heatmap clustering of genes lists (selecting statistical thresholds) and functional enrichment analyses using a connection to enrichr. https://matrixapp.sk8.inrae.fr

Ce projet est un exemple de plugin utilisant le noyau de l'application des SOERE

Electron Desktop App For Bisulfite Sequencing Processing Software (BiSePS)

https://raphael.segura.pages.mia.inra.fr/lebarp_hauteur2022

Connecteur entre dataverse et jupyterhub