Explore projects

It contains the simulator of the model DISTIGRI describe in the work https://link.springer.com/article/10.1007/s10530-023-03062-y

Toolbox for the inverse problem solution to identify sources of pheromone emission.

Python package for OpenFLUID

diversity-based enumeration of optimal context-specific metabolic networks using the cobrapy library

github mirror: https://github.com/MetExplore/dexom-python

Pan1c: a Snakemake workflow to build chromosome level pangenomes.

Obtaining cell-specific metabolic models through enumeration with DEXOM

Python docker image with linters

GenoFig is a tool for graphical vizualisation of annotated genetic regions, and homologous regions comparison. It was designed to be as easy to use as possible for biologists.

Caulifinder : a pipeline for automatic detection and annotation of caulimovirid endogenous viral elements in plant genomes

Python library providing a variety of useful functions for 4P modules

Interekt (INTERactive Exploration of Kinematics and Tropisms) is a user-friendly software for tracking and modeling plant motions.