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Named Entity Normalization for the MilkOligoCorpus

Named Entity recognition for the MilkOligoCorpus

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.

BioNLP-ST format parser in Python

pdf2blocs merges the result of pdftotext and pdftohtml commands (from poppler project). The pdf conversion was optimized to translate the Plant Health Alert Bulletin into html files. This project is part of the d2kab project.

GWT experiments: minimum and basic dependencies to run on Tomcat along with code quality checkers.

Binary relation extraction for the HoloOligo corpus

Caulifinder : a pipeline for automatic detection and annotation of caulimovirid endogenous viral elements in plant genomes