Explore projects

Pipeline for annotating VHHs from NGS sequences.

FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.

A new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S, 23S rRNA genes amplicons DOI: 10.5281/zenodo.3678129

GEGA - Gallus Enriched Gene Annotation - Easily explore the richness of the chicken genome

A set of population genomic scripts and utilities.

Source code for https://iant.toulouse.inra.fr/T3E

A pipeline to compute correspondance tables between genome annotations

NGSPipelines integrates pipelines and user interfaces to help biologists to analyse data outputed from biological applications such as RNA-seq, sRNA-seq, Chip-Seq, BS-seq, and so on.

Tutorial example for creation of a snakemake workflow using a singularity container on a hpc

UTOPIA: an automatically UpdaTed, cOmPlete and consistent ITS reference dAtabase