Explore projects

GenoFig is a tool for graphical vizualisation of annotated genetic regions, and homologous regions comparison. It was designed to be as easy to use as possible for biologists.

Caulifinder : a pipeline for automatic detection and annotation of caulimovirid endogenous viral elements in plant genomes

Interekt (INTERactive Exploration of Kinematics and Tropisms) is a user-friendly software for tracking and modeling plant motions.

Bibliothèque Java pour calculer des indicateurs agro- et éco-climatiques à partir de données climatiques journalières ou horaires et des donnés phénologiques. Un des modèles phénologiques peut être utilisé à la place des données phénologiques. (Documentation en ligne)

scripts to remap markers as pairs of bait sequences or context sequences.

Bibliothèque cliente Java pour utiliser l'API issues de GitLab pour les demandes de support des applications AgroClim.

Nextflow pipeline creating a Neo4j Ortho_KB database.

Juicer workflow, but compressed :) (Using BAM instead of SAM)

Scripts for the analysis described in the paper "Major reorganization of chromosome conformation during muscle development in pig" (Marti-Marimon et al, 2021).

http://dx.doi.org/10.3389/fgene.2021.748239