Explore projects

Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet

Run Ocelet in a docker container.

Some scripts for the methylation analysis of the ChickStress project.

search a genome for NBS-LRR (NLR) disease resistance genes based on the presence of the NB-ARC domain using the consensus sequence of the Pfam HMM profile (PF00931) and class specific consensus sequences built from Vitis vinifera. https://doi.org/10.

Miroir du projet kernel

Tutorial example for creation of a snakemake workflow using a singularity container on a hpc

List of workflows (nextflow/snakemake) tested for Genotoul Cluster.