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Source code for the modelling and inference approach implemented by the INRAE team

Docker file UAI 2022

All scripts concerning GBS analysis

Bisulfite Sequencing Processing Software : Snakemake Pipeline

report from a BAM alignment the number of BX:Z: tags shared between to blocks of given size

Docker files to test and deploy dgenies

The development of RootStemExtractor has been moved to https://forgemia.inra.fr/felix.hartmann/interekt

Implements in R the Rothamsted RothC package. Adds useful functions.