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GAFL / Pipelines_Snakemake / easy_qtlseq
MIT LicenseUpdated -
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SubtilNet / Arboreto
BSD 3-Clause "New" or "Revised" LicenseA fork of GRNBoost2 arboreto from https://github.com/aertslab/arboreto.git at 11/03/2024. The idea here is to change the code to be able to extract the models and make goodness of fit with predicted expression.
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SubtilNet / DeepSEM
MIT LicenseA fork of Deep learning VAE DeepSEM from https://github.com/HantaoShu/DeepSEM.git at 18/03/2024. The idea here is to change the code to be able to extract the models and make goodness of fit with predicted expression
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urgi-is / Datadiscovery Partners Indexers
BSD 3-Clause "New" or "Revised" LicenseCollection of indexer for FAIDARE, WheatIS,
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bios4biol / intronSeeker
GNU General Public License v3.0 or laterUpdated -
Code to reproduce the results of "Gene regulatory network inference methodology for genomic and transcriptomic data acquired in genetically related heterozygote individuals", https://doi.org/10.1093/bioinformatics/btac445
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DUGAT-BONY Eric / Cheese_virome
Creative Commons Attribution Share Alike 4.0 InternationalUpdated -
Jacques Lagnel / Smartdenovo
MIT LicenseUpdated -
Jacques Lagnel / fromin2p3
MIT LicenseUpdated -
Tutorial example for creation of a snakemake workflow using a singularity container on a hpc
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DipSO / Kubespray
Apache License 2.0Updated