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App Nextcloud permettant de publier des fichiers du Nextcloud INRAE vers DataINRAE

Sirius Quality BioMa Wheat LAI module

mixKernel is a multiple kernel framework that allows to integrate multiple datasets of various types into a single analysis. The package is published on CRAN: https://cran.r-project.org/package=mixKernel

This project is the source repository of the CRAN package 'hicream' https://cran.r-project.org/package=hicream.

It performs Hi-C data differential analysis based on pixel-level differential analysis and a post hoc inference strategy to quantify signal in clusters of pixels. Clusters of pixels are obtained through a connectivity-constrained two-dimensional hierarchical clustering.

planemo 4 SIWAA

Experimental data vizualization for FAANG.

SAMBA (R) est une interface pour analyser les résultats de sampling de réseaux métaboliques générés à partir de SAMBApy sous Python. Elle est composée d'une une partie comparaison (calcul de différence) et une partie visualisation graphique des résultats.

https://samba.sk8.inrae.fr/

RNAseq and EMseq analyses for the rosepigs project on stomach mucosa samples

Code storage Area of the RECORD Project packages.

https://metatoul.pages.mia.inra.fr/graphstats

Share some notes and scripts on the use of STAC.

SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence.

https://shinemas2.readthedocs.io/

Ensemble de scripts utilisés au LRF pour traiter les données d'amplicon sequencing 16S et ITS.

Visualisation de données métagénomiques.

basis for development of interactive population dynamics web applications