Explore projects

TilSeg is a tool designed to use the information from contiguous probes and it will merge them into longer segment stretches. Depending on the experiment, the chip type and the statistical analysis made, those segments may have different meanings and

PatHways lOngitudianal and diffErential aNanlysis in metabolomICS (PHOENICS). Perform differential analysis of metabolic pathways based on longitudinal metabolomics data.

The SeSAM R package allows fully automatic construction of two successive genetic maps: a first one including an optimized subset of markers ensuring the robustness of orders to a given statistical threshold, and a second one including almost all polymorphic markers. It can handle all common types of biparental mapping populations, including progenies obtained from crossing heterozygous parents. In addition to the automatic procedure, SeSAM includes many functions for interactive mapping, file formats conversions, and generates many graphs useful to assess the quality of data and maps.

Multiple is a program for de novo discovery of DNA motifs corresponding to Transcription Factor binding sites based on a probabilistic model of the DNA sequence that incorporates expression data as covariates.

Paquet wapt pour installer la config de Firefox.

https://elisemaigne.pages.mia.inra.fr/slides/surapprentissage/

Collection of indexer for FAIDARE, WheatIS,

https://champ.sk8.inrae.fr

CHaMP is an RShiny app that loads a list of compound masses from twin-peaks analysis, and build a mass difference network from which is extracted the connected component containing a mass of interest. It provides a network visualization of the sub-network that encompass potential metabolic and spontaneous reactions that leads to degradation/metabolization products.