Explore projects

A new user-friendly metabarcoding pipeline for the characterization of microbial diversity from 16S, 18S, 23S rRNA genes amplicons DOI: 10.5281/zenodo.3678129

Supports pour la formation shiny - Plateforme de Biostatistique – Génopole Toulouse Midi-Pyrénées

A fork of asf-challenge, for studying host density effects on dissemination speed. Info about the ASF challenge can be found here https://www6.inrae.fr/asfchallenge

Slideshow on good practices in data-management. https://umr-astre.pages.mia.inra.fr/training/gestion-donnees/

Global Statistical Inference for Global Sensitivity Analysis

R-package proposing a framework to apply FAIR principles based on reports created using the bookdown R-package and published as a website (e.g. gitlab pages) and data located on a owncloud/nextcloud server

Dataset Federator

We introduce jflow, a Workflow Management System (WMS), composed of Jquery plugins which can easily be embedded in any WEB application and a Python library providing all requested features to setup, run and monitor workflows.

A shiny application that make time series events selection and modification simpler.

Lien vers l'application : https://crues-r.sk8.inrae.fr

Introduction à la Modélisation en Épidémiologie Animale

Tutoriel pour le package R data.table.

Accompagne les supports de cours : https://elisemaigne.pages.mia.inra.fr/2023-datatable/index.html.

Voir le README pour le lancement du tutoriel.