Explore projects

Exploration interactive de scenario de simulation du modèle MF1.2-1ha du projet Atcha.

https://mf-12-1-ha.sk8.inrae.fr/ | https://shiny.sk8.inrae.fr/app/atcha-mf-12-1-ha | https://shiny.sk8.inrae.fr/app_direct/atcha-mf-12-1-ha

Perl extension for fragment annotation in metabolomics

Tutoriel de prise en main de RMardown

SAMBA (R) est une interface pour analyser les résultats de sampling de réseaux métaboliques générés à partir de SAMBApy sous Python. Elle est composée d'une une partie comparaison (calcul de différence) et une partie visualisation graphique des résultats.

https://samba.sk8.inrae.fr/

Scripts related with database development in stacomi.

Contains code to create and manage the SUDOANG rivers database

Docs : https://optirrighive.pages.mia.inra.fr/OptirrigCORE

What is “OptirrigCORE” package ? The OptirrigCORE package in R is based on the Optirrig model. It facilitates the extraction and formatting of observation data used by the model, as well as the integration of plant, soil and yield descriptions. It supports various analytical methods, such as Ex-Post and Ex-Ante analyses, with a view to drawing up an optimised irrigation schedule based on the criteria. The package includes all the calculation tools needed to describe biophysical processes with a generalist approach. It can be used as a dependency or complement to modify and reinterpret biophysical descriptions. What’s more, it automates the modeling process, the description of biophysical processes and the analysis of results and performance, guaranteeing a reproducible approach. It also makes it easy to compile results in automated reports.

Hosts the different implementation of EDA model

A small project to set up a filtered search bar like in Gitlab (pipelines page)

CarthaGène is multi-population genetic/radiated hybrid mapping software. CarthaGene looks for multiple populations maximum likelihood consensus maps using a fast EM algorithm for maximum likelihood estimation and powerful ordering algorithms.

Gestion des collections d'échantillon - management of samples collections