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jvenn is a plug-in for the jQuery Javascript library. It is a flexible tool, based upon the venny tool first developed by J.C Oliveros (Oliveros, J.C (2007) VENNY, An integrative tool for comparing lists with Venn Diagrams).

scripts to remap markers as pairs of bait sequences or context sequences.

OpenFLUID framework and applications

FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.

Galaxy wrappers for FROGS

mechanistic-statistical environment

https://msegrp.pages-forge.inrae.fr/mse

PASTE (Platform for Automated Simulation and Tools in Epidemiology) is a software pipeline that produces a web architecture for a decision-support tool based on mechanistic epidemiological models (written with EMULSION)

An end-to-end deep learning solution supporting multiple model architectures with advanced features for training, evaluation, and production-ready inference.

Génération de fichiers .properties de traduction pour Dataverse à partir de fichiers de métadonnées .tsv"

SHiNeMaS is a database with its web interface, dedicated to the management of the history of seed lots and related data like phenotyping, environment and cultural practices. SHiNeMaS is freely available under GNU Affero GPL Licence.

https://shinemas2.readthedocs.io/

Geomatic tool for landscape discretization and pesticides transfert

Experimental data vizualization for FAANG.

GeneralDichotomy: a general multi-objective optimization package

Visualisation de données métagénomiques.

Nextflow pipeline to extract syntenic blocks using the MCScanX program.

XyDyS (Xylogenesis Dynamics Simulator) is a software for interactive exploration of computational models of wood formation.