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pepragrodiv / pangenome / pansel
GNU General Public License v3.0 onlyUpdated -
Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.
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URGI-Anagen / TE_finder
CeCILL Free Software License Agreement v2.0A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.
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Stacomi / stacoshiny
MIT LicenseUpdated -
Sandra Pelletier / anaDiff
CeCILL Free Software License Agreement v2.1Transcriptomic analysis, microarray and rnaseq, used in IRHS unit
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DipSO / Bridge DataINRAE Nextcloud
GNU Affero General Public License v3.0App Nextcloud permettant de publier des fichiers du Nextcloud INRAE vers DataINRAE
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Matthias Zytnicki / yahs
MIT LicenseUpdated -
Thomas Schiex / PMRF
MIT LicenseA clone of the PMRF code (MIT licence) to be able to add some minor bells and whistles for symmetry handling
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PAPPSO / PAPPSOms-tools
GNU General Public License v3.0 onlyset of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....
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Dynafor / Workflows / HedgeTools
GNU General Public License v2.0 or laterUpdated -
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select or stitch the best image for each uplot and save it in "selected_images" directory
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A standalone version of the function performing dynamic programming in a band
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