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DARBOT Vincent / metagWGS
GNU General Public License v3.0 onlymetagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. It has been developed in collaboration with several CATI BIOS4biol agents.
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JACQUIN Laval / khamix
GNU General Public License v3.0 or laterKernelized HAplotype-based MIXed model association mapping (KHAMIX)
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Example GitBook site using GitLab Pages: https://pages.gitlab.io/gitbook
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RABOTIN Michael / Hru Delin
GNU General Public License v3.0 or laterUpdated -
JACQUIN Laval / beagle_v4-0
GNU General Public License v3.0 or laterThis repository provides a generic shell script, the Beagle 4.0 executable, and additional utilities designed to streamline the imputation process.
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A library that contains a subset of the ProteoWizard libpwiz library with code mainly aimed at loading MS files (XML-based and MGF).
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Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet
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PAQmiR : Prediction Annotation and Quantification of miRNA with miRDeep2
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Singularity / bioinfo / bbmap
MIT LicenseUpdated -
Nathalie Rousse / erecord-deploy
MIT LicenseUpdated -
record / CarboSeq SIWAA API
MIT LicenseUpdated -
Raphaël Ribes / Asm4pg-MTruncatula
GNU Affero General Public License v3.0Fork of asm4pg but for haploid or very homozygous/inbred.
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