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Code storage Area of the RECORD Project packages.

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

Life game (Conway) using vle::discrete_time cells and vle.generic.builder Builder model to generate cells and their connexions

X!TandemPipeline is a free software (GPL v3) that helps you to filter and group your peptide/protein identifications from MS/MS mass spectra.

Publication: J. Proteome Res. 2017, 16, 2, 494–503 -- https://doi.org/10.102

mechanistic-statistical environment

https://msegrp.pages-forge.inrae.fr/mse

GroupingProtein does filtering, protein inference and grouping of mass MS/MS identification result (thousands of samples, high resolution mass spectrometers)

MineXpert2 (of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to visualize mass spectrometric data in their full MS^n depth. Sophisticated mouse-driven mass data integrations are easily performed. It is the continuation of mineXpert2, ported to the rewrittent libXpertMass and libXpertMassGui libraries.

PAPPSOms++ is a comprehensive C++ library including useful functions to handle mass spectrometric data, either in a proteomics setting or for data visualization. Abstractions include peptides, proteins, isotopic clusters, mass/drift spectra...

archive du projet recmoustics

Un modèle d'irrigation couplé au modèle bio-physique STICS

i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution

Decloud is a framework to remove clouds in Sentinel-2 images from joint Sentinel-1 (SAR) and Sentinel-2 (Optical) images or time series.

OpenFLUID framework and applications

MassChroQ (Mass Chromatogram Quantification) is a powerful and versatile software that performs retention time alignment, XIC extraction, peak detection and quantification on data obtained from liquid chromatography-mass spectrometry techniques.