Resolve "change the location of the ontologies"

Closes #74 (closed)

generate_concept_path.snakefile

-## config file
-configfile: "config/config.yaml"
-
-
-
-ONTONAMES = 'BioNLP-OST+EnovFood-Habitat BioNLP-OST+EnovFood-Phenotype BioNLP-OST+EnovFood-Use'
-
-
-
-''' 
-all
-'''
-rule all:
-	input:
-		expand("ancillaries/{ontoname}.paths", ontoname=ONTONAMES.split(' '))
-		
-
-
-'''
-generate concept paths
-'''
-rule generate_concept_path:
-	input:
-		onto="ancillaries/{ontoname}.obo"
-	output:
-		paths="ancillaries/{ontoname}.paths"
-	params:
-		plan="plans/get_onto_paths.plan"
-	singularity:config['SINGULARITY_IMG']
-	shell: """alvisnlp -cleanTmp -verbose \
-		-alias input {input.onto} \
-		-alias output {output.paths} \
-		 {params.plan}
-		"""