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panREPET

Project information

panREPET is a pipeline detecting shared Transposable Element (TE) insertions among a pangenome. It takes in charge multiple de novo whole-genome assemblies of the same species. It compares TE copies between each pair of genomes then identifies TE copies shared by a group of individuals.

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README
CeCILL Free Software License Agreement v2.0

Created on

March 13, 2020

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