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i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution

Code and workflows for the analyses reported in “Dici: a novel DNA transposon reshaping the genome of the opportunistic yeast Diutina catenulata”

This Shiny application visualizes the environmental niches and temporal patterns of two sturgeon species, Acipenser sturio and Acipenser oxyrinchus. It allows users to explore habitat suitability indices and compare their spatial–temporal dynamics across catchments.

https://stur-mix.sk8.inrae.fr

FAIDARE: FAIR Data-finder for Agronomic Research

It provides web services (based on the BrAPI standard) and a web interface with easy to use filters to facilitates the access to plant datasets from a federation of sources.

Projet de la version V2 de l'application des ORE.

Le projet est constitué de 2 sous projet :

La partie serveur qui fournit les web services de l'application

La partie UI qui fournit une interface VueJS permettant d'interroger ces Web Service

Geomatic tool for landscape discretization and pesticides transfert

Nextflow pipeline creating a Neo4j Ortho_KB database.

A small project to set up a filtered search bar like in Gitlab (pipelines page)

FAIR-DATA management application stack for laboratory experiment

Project related to the development of a basket for RARe portal (https://urgi.versailles.inrae.fr/rare).