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Depot publique pour les outils de gestion de code lié à la plateforme Record

Projet PESHMELBA pour émilie Rouzies

simulateur de l'invasion du moustique Aedes

2h workshop slideshow on how to use Rmarkdown format for writing reproducible report (or slideshow, or even paper)

Spike and slab variable selection in nonlinear models

metagWGS is a workflow dedicated to the analysis of metagenomic data. It allows assembly, taxonomic annotation, and functional annotation of predicted genes. It has been developed in collaboration with several CATI BIOS4biol agents.

Analysis and figure production for Ts estimation and stomatal conductance method comparison.

List of workflows (nextflow/snakemake) tested for Genotoul Cluster.

Benchmark second and third generation sequencing technologies on 3 synthetic microbial communities

DeepGNN: Semi-supervised deep learning with graph neural network for cross-species regulatory sequence prediction

Une CLI pour le contrôle d'un cluster kubernetes en python.

Permet de démarrer des "VM" et des grilles condor avec un accès SSH.

Implements in R the Rothamsted RothC package. Adds useful functions.

The development of RootStemExtractor has been moved to https://forgemia.inra.fr/felix.hartmann/interekt

Docker files to test and deploy dgenies

report from a BAM alignment the number of BX:Z: tags shared between to blocks of given size

Bisulfite Sequencing Processing Software : Snakemake Pipeline