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Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.

Getting sequences flanking blat hits / Extraction des séquences flanquantes les hits blat.

Source code for the modelling and inference approach implemented by the INRAE team

Scripts used in: "Integration of genomic selection into winter-type bread wheat breeding schemes: a simulation pipeline including economic constraints" S. Ben-Sadoun, A. Fugeray-Scarbel, J. Auzanneau, G. Charmet, S. Lemarié, S. Bouchet

utilitaire pour la manipulation de fichiers Fasta : ajout de métadonnées (espèces, numéro de release, source...), traduction, traitements (decoy, reverse, peptide reverse...), combinaison de fichiers.

i2MassChroQ (identification & inference -- mass chromatogram quantification) is the successor of X!TandemPipeline-Java. Following a full rewrite in C++17 and integration of the MassChroQ module, i2MassChroQ features a quantitative proteomics solution

Hardware description and pieces of software for DIY MiniRead 96-well plate optical reader, designed to monitor growth kinetics of yeast (or bacterial) cells.

C++ implementation of SpecOMS and new developments

Pour projets SeaTech sur la Fast Marching Method