Explore projects

Model to simulate the spread of Map within and between herds via trade movements between dairy herds. Some control measures can be applied. Model is mechanistic and data-driven, stochastic, discrete-time and individual-based.

App Nextcloud permettant de publier des fichiers du Nextcloud INRAE vers DataINRAE

https://umr-astre.pages.mia.inra.fr/sit-methods/

A suite of C++ programs developed for transposable element search and their annotation in large eukaryotic genome sequence. A part of the REPET package.

Geomatic tool for landscape discretization and pesticides transfert

PAPPSOms++ is a comprehensive C++ library including usefull functions to handle proteomics data (spectrum, peptides, ions, isotopes).

Pompd: Positive Multistate Protein Design

mineXpert2 (of the http://www.msxpertsuite.org software collection) is a desktop-oriented program that allows one to visualize mass spectrometric data in their full MS^n depth. Sophisticated mouse-driven mass data integrations are easily performed.

A clone of the PMRF code (MIT licence) to be able to add some minor bells and whistles for symmetry handling

set of usefull mass spectrometry and proteomics utilities used by the PAPPSO team (http://pappso.inra.fr/). Get ion tables from peptides, SVG drawings of MS/MS annotated spectrum, expected intensity ratio of isotopes from a peptide....

R'MES is a tool for studying word frequencies in biological sequences.

The computer-model tool CRASH (Crops Rotation and Allocation Simulator using Heuristics) aims at helping technical advisors in supporting farmers in their choices and anticipating agricultural water needs depending on crop acreage.

Multiple is a program for de novo discovery of DNA motifs corresponding to Transcription Factor binding sites based on a probabilistic model of the DNA sequence that incorporates expression data as covariates.

Documentation pour le SI SOERE Prairies Permanentes : https://urep.pages.mia.inra.fr/soere-pp/doc_soere-pp