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Filters and performance on GBS datasets.

Exhaustive analysis of results on GBS datasets (Ceanhorabditis elegans, Arabidopsis thaliana et Drosophila melanogaster) to find filters and study the impact of abundance model and depth of sequencing on performances.

  • Generate A. thaliana and D. melanogaster datasets
  • Run alignement analysis jupyter on the three datasets
  • Run filters and merging events jupyter on the three datasets
  • Perform analysis of results (particularly ORF and proteic alignements) on the three datasets
Edited by Emilien Lasguignes